Computer Science R Programming Science

Analyzing YSI data through clustering

Update 10/13/15 – Minor improvements to code and an update to the latest findings. CTD data (conductivity, temperature and depth) from a YSI provides a quick and methodologically simple way to estimate the current water column state by, literally, dropping an instrument off the side of a boat. During each deployment the YSI records the […]

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Computer Science R Programming Science

Markov Chain Monte Carlo: A Practical Introduction

Markov Chain Monte Carlo simulation sounds, admittedly, like a method better left to professional practitioners and the like; but please don’t let the esoteric name fool you. MCMC, as we like to call is, is a powerful yet deceptively simple technique that can be useful in problems ranging throughout science and engineering. Since this promises […]

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Computer Science Daily Dose R Programming

Which Witch is Which

This post is an elaboration of an iRKernel Notebook which can be found at http://misc.tkelly.org/Which_Witch.html. For a previous article on the iPython Notebook, see here. Every programming language comes pre-packaged with certain basic functions, or methods, that are considered standard. These generally include methods for sorting objects, conversions between basic types (e.g. integer float string), […]

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Computer Science Daily Dose R Programming Science Technology

How Twitter Improved my Ecological Model

For a last couple weeks I’ve been working on a marine ecosystem model using a technique called Inverse Modeling(1)I’ll be sure to do a writeup on what Inverse Modeling is and what makes it interesting in the future.; and while there’s been lots of progress, I’m starting to get to the point where the model takes some […]

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